../../tmp/servers/virsirnadb/1961859879
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi1896 | 1 | tgctcgcgaatgtggttta | 19 | |
| Z86099.2 | Herpes simplex virus type 2 (strain HG52), complete genome | 104871 | ................... | 104889 | 100 |
| NC_001798.1 | Human herpesvirus 2, complete genome | 104871 | ................... | 104889 | 100 |
| GU734771.1 | Human herpesvirus 1 strain F, complete genome | 104072 | ................... | 104090 | 100 |
| GU734772.1 | Human herpesvirus 1 strain H129, complete genome | 104116 | ................... | 104134 | 100 |
| NC_001806.1 | Human herpesvirus 1, complete genome | 104178 | ................... | 104196 | 100 |
| NC_007605.1 | Human herpesvirus 4 type 1, complete genome | 101174 | __.........c.t..... | 101190 | 78 |
| AY961628.3 | Human herpesvirus 4 strain GD1, complete genome | 101092 | __.........c.t..... | 101108 | 78 |
| NC_009334.1 | Human herpesvirus 4, complete genome | 102004 | __.........c.t..... | 102020 | 78 |
| AB097932.1 | Human herpesvirus 3 DNA, complete genome, strain: Oka, sub_strain: vO | 58285 | .....tt.........___ | 58270 | 73 |
| AB097933.1 | Human herpesvirus 3 DNA, complete genome, strain: Oka, sub_strain: pO | 58261 | .....tt.........___ | 58246 | 73 |
| AY548171.1 | Human herpesvirus 3 strain BC, complete genome | 58892 | .....tt.........___ | 58877 | 73 |
| AY548170.1 | Human herpesvirus 3 strain MSP, complete genome | 58413 | .....tt.........___ | 58398 | 73 |
| DQ008354.1 | Human herpesvirus 3 strain VarilRix, complete genome | 58334 | .....tt.........___ | 58319 | 73 |
| DQ008355.1 | Human herpesvirus 3 strain VariVax, complete genome | 58332 | .....tt.........___ | 58317 | 73 |
| AJ871403.1 | Human herpesvirus 3 (HHV-3), complete genome, isolate HJ0 | 58318 | .....tt.........___ | 58303 | 73 |
| DQ452050.1 | Human herpesvirus 3 isolate HHV3_M2DR, complete genome | 58292 | .....tt.........___ | 58277 | 73 |
| DQ457052.1 | Human herpesvirus 3 strain CA123, complete genome | 58272 | .....tt.........___ | 58257 | 73 |
| DQ479953.1 | Human herpesvirus 3 strain SD, complete genome | 58351 | .....tt.........___ | 58336 | 73 |
| DQ479954.1 | Human herpesvirus 3 strain Kel, complete genome | 58417 | .....tt.........___ | 58402 | 73 |
| DQ479955.1 | Human herpesvirus 3 strain 11, complete genome | 58470 | .....tt.........___ | 58455 | 73 |
| DQ479956.1 | Human herpesvirus 3 strain 22, complete genome | 58246 | .....tt.........___ | 58231 | 73 |
| DQ479957.1 | Human herpesvirus 3 strain 03-500, complete genome | 58862 | .....tt.........___ | 58847 | 73 |
| DQ479958.1 | Human herpesvirus 3 strain 36, complete genome | 58416 | .....tt.........___ | 58401 | 73 |
| DQ479959.1 | Human herpesvirus 3 strain 49, complete genome | 58482 | .....tt.........___ | 58467 | 73 |
| DQ479960.1 | Human herpesvirus 3 strain 8, complete genome | 58592 | .....tt.........___ | 58577 | 73 |
| DQ479961.1 | Human herpesvirus 3 strain 32 passage 5, complete genome | 58318 | .....tt.........___ | 58303 | 73 |
| DQ479962.1 | Human herpesvirus 3 strain 32 passage 22, complete genome | 58348 | .....tt.........___ | 58333 | 73 |
| DQ479963.1 | Human herpesvirus 3 strain 32 passage 72, complete genome | 58428 | .....tt.........___ | 58413 | 73 |
| DQ674250.1 | Human herpesvirus 3 strain NH29_3, complete genome | 58328 | .....tt.........___ | 58313 | 73 |
| EU154348.1 | Human herpesvirus 3 strain SVETA, complete genome | 58335 | .....tt.........___ | 58320 | 73 |
| NC_001348.1 | Human herpesvirus 3, complete genome | 58398 | .....tt.........___ | 58383 | 73 |